Its best to run through some notes and pay attention to the kind of pressure you use while playing before you intonate. Hey, a guitar could be intonated to one persons but, it will not be intonated to the next guy who picks up the guitar due to different pressures.
Fretted at the 12th and open string is the best method. Like I said before, the Harmonic reads sharp. Well, on the guitar I picked up today it did but, others I have seen read flat. Point is, it is not nearly as accurate.










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